Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913832.1_cds_XP_016463823.1_56913
CDS Infomation

[gene=LOC107786835] [db_xref=GeneID:107786835] [protein=uncharacterized protein LOC107786835] [protein_id=XP_016463823.1] [location=complement(join(28755..29556,30162..30253,30350..30595,31220..32053))] [gbkey=CDS]
Sequence

ATGGCGAATTTGAAATCTGGGGTTCTTGTAAAATTACTTGAAGATATGAAAATTGGTAAT
GAAAATGCCACGTTAGAAGATCAAAATAAGCCAGCATTGTTACAAATCAGAAGCATAATC
CCTGTCCTTGAAGAAGGTAATTTATTGCCCAATAGGGGATTTTGCCTCAAGATTTCAGAT
GCATCACACGCAATTTATGTCACATTGCCCCAAGACCAAAATGAGCTAATTTTAGGCAAC
AATTTAAAACTAGGACAATTCATTTATGTACATAAATTGGAGGATGCACAACCATTTCCA
TTGCTCAAAGATTTAACGCCTCTCCCTGGTAGGCGTCCGTGTGATGGAACCCCTGAAGAT
ACTGGCTCGGTTCCAAATTTTGAGAAGATTCTTGATTCATCCAATTATGATTTTATTGTT
GAAAAGGGTGTCATTTCTGAAGAAAAGATTATGGAAATATCATCAAATTTAAGAAGATTA
TCTTTAGAGTCATCTGATGATATAGAGGAAGTGAAGAAGAAAAGTGATGTTCTTGAGAAT
AGTACTGCTAAAGGCAAGTTTAGGTCATTGAGTGCTTCAAAAACTCGTCCAGGAAATAAA
AGATTTGATGTTGAGAGAAGAAATTCTGATGTTCTGGGGTTAGTTAGTAGGAGTAGGAGA
ATGTCTGTTGACAATGATAGTGATACGGATAGCACGGTATCTTCAGTTTCATCATCCATC
TGGAATTCTAAGAGGAAAAGTTGGAATGAGTTAAAAAAATTGGGTGCTGATGAGATTTTT
GATTCTTCAGTTGTCAAACACAATATCAGACCACCACGTTGTCGTAGTGCAACTGTTTCA
CCTGTTCGTTCTGTCAAATACGACAGCTCAGATGACAATTCAAGTTCAATATCAAGAAGA
AGGCTTGTTGGTTCTGCAAAGAAAATAGTCAAGAGTTCAACTAAGAACAAGAATTCTTTG
TCAAAGGTAAACTCTGAACAAGCCTTCCATCCAATTAAACGTTTAGTATATGACAGACAA
GGCGCAGAAAGTGGGATTTCATGGGATTCACTGCCCTCAAGTTTGGTGAACCTTGGCAAG
GAGGTAATAAAGCAAAGAGACATTGCTCTCTTTGCAGCTGCAGATGCTTTGCAAGAAGCT
TGTGCAGCTGAGAGGTTGCTCAATTCATTAAGCAAATTCTCGGAGTTTCATTTACCTGAA
GAAGATGATCTACAACGTCATGTTGATATGTTTTTGGATCTTCAAGATGATATGGCTCAG
ACAAGACTAATAACGAAATCACTGACAAATATAAGTCCACTTGGACTAAAAGAAACAGAT
TCAAGTAGCACAATTTCAGATAATGAAGCATTGACTATTGCGGTGCAAAGAAAGAAAAAT
GCAGCTGCATGGATAAAATCTGTTGTGGCTTTAGATCTTTCACCATGCTCCACTTCCCTC
AATCAAATTCCTAACACTATGACCGTCGTCAATACATTGAAGAAGTCAAGTACATCGAAT
CACAGTGCAAAACAAAAAGGCGCAAACATCATGAAAACTGACAATAGAAACACTGATGAC
ATTTCTTTTGTATTGGCATCTAACAGTGACACACATTCTGAATGGACCAGTGGTAGCACT
ATCCCTGCAGCTACTCGCCTAGCTTCTGCATTGCAGGACGAGTGTAGAAAAATGTTTTTG
TGTTTCATAGAGAAGTACATTAATGAACTTGAAAGAAAAATGTCTCTTATGGTATCAGAT
AACCAAGTAGCAGCAATGATGTATAAGGTCAAGAGAGTAAATGACTGGTTAGATGTGATC
ATCAACAAGGAAGGAAATCCTCAAAAAGATGCGAGCAAAGAAGGTTCGAACTTAGATGAA
ACAGAAATTGAAGCATGTAATAGGGTGAGGAACAAAATATATGGTATCTTACTGAAGAAT
GTGGAGAGGACTGCTATGGCTTTTGAAAGCAGCAATGCAACGTTACATCGTTGA

Peptide Sequence

PEP ID

XP_016463823.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107786835 [Nicotiana tabacum]
Sequence

MANLKSGVLVKLLEDMKIGNENATLEDQNKPALLQIRSIIPVLEEGNLLPNRGFCLKISD
ASHAIYVTLPQDQNELILGNNLKLGQFIYVHKLEDAQPFPLLKDLTPLPGRRPCDGTPED
TGSVPNFEKILDSSNYDFIVEKGVISEEKIMEISSNLRRLSLESSDDIEEVKKKSDVLEN
STAKGKFRSLSASKTRPGNKRFDVERRNSDVLGLVSRSRRMSVDNDSDTDSTVSSVSSSI
WNSKRKSWNELKKLGADEIFDSSVVKHNIRPPRCRSATVSPVRSVKYDSSDDNSSSISRR
RLVGSAKKIVKSSTKNKNSLSKVNSEQAFHPIKRLVYDRQGAESGISWDSLPSSLVNLGK
EVIKQRDIALFAAADALQEACAAERLLNSLSKFSEFHLPEEDDLQRHVDMFLDLQDDMAQ
TRLITKSLTNISPLGLKETDSSSTISDNEALTIAVQRKKNAAAWIKSVVALDLSPCSTSL
NQIPNTMTVVNTLKKSSTSNHSAKQKGANIMKTDNRNTDDISFVLASNSDTHSEWTSGST
IPAATRLASALQDECRKMFLCFIEKYINELERKMSLMVSDNQVAAMMYKVKRVNDWLDVI
INKEGNPQKDASKEGSNLDETEIEACNRVRNKIYGILLKNVERTAMAFESSNATLHR

Transcript Sequence

Gene sequence data has not been registered.